Compute weight overlap stats — interaction.table • SelectSim

Compute weight overlap stats

Usage

interaction.table(
  al,
  als,
  obs,
  wobs,
  r.obs = NULL,
  r.wobs = NULL,
  null,
  maxFDR = 0.2,
  n.cores = 1,
  estimate_pairwise = FALSE,
  n.permut = 1000
)

Arguments

al: The alteration matrix
als: The alteration matrix stats object
obs: The observed overlap
wobs: The weighted observed overlap
r.obs: The random observed overlap
r.wobs: The random weighted observed overlap
null: The null model
maxFDR: The maxFDR cutoff
n.cores: The number of cores
estimate_pairwise: Compute pairwise or not
n.permut: The number of permutation

Value

The table of results