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Generate S matrix

Source: R/selectX_create.r
generateS.Rd

Generate S matrix

Usage

generateS(gam, sample.weights, upperBound = 1)

Arguments

gam

the gam with genes*samples

sample.weights

the samples weights

upperBound

clip the values greater than 1 to keep it bounded between 0 to 1

Value

S the S matrix

Examples

gam <- matrix(c(0,1,1,0,1,1), nrow = 2,
              dimnames = list(c("geneA","geneB"), c("s1","s2","s3")))
generateS(gam, sample.weights = c(s1 = 1, s2 = 1, s3 = 1))
#>              s1        s2        s3
#> geneA 0.6666667 0.6666667 0.6666667
#> geneB 0.6666667 0.6666667 0.6666667