This function filters a MAF dataframe by sample id

filter_maf_schema() takes a maf file and filters a MAF dataframe by retaining only the rows with a column value included in the values list

Usage

filter_maf_schema(maf, schema = TCGA_maf_schema, column, values, ...)

Arguments

maf

a maf as dataframe

schema

a schema of datafrane check Select::TCGA_maf_schema for example

column

column in maf file to filter

values

a list containing the elements to file

...

Other options

Value

filtered_maf a filtered maf file