This function filters a MAF dataframe by retaining (or discarding) missense mutations

filter_maf_missense() takes a maf file and filters a MAF dataframe by retaining only the rows with a column value included in the values list

Usage

filter_maf_missense(maf, schema = TCGA_maf_schema, ...)

Arguments

maf

a maf as dataframe

schema

a schema of datafrane check Select::TCGA_maf_schema for example

...

Other options

Value

filtered_maf a filtered maf file