Filter maf function

filter_maf_column() takes a maf file and filters a MAF dataframe by retaining only the rows with a column value included in the values list

Usage

filter_maf_column(maf, values, column, inclusive = TRUE, fixed = TRUE, ...)

Arguments

maf

a maf as dataframe

values

a list containing the elements to filter

column

column in maf file to filter

inclusive

a boolena to include or exclude the dataframe with values in list provided

fixed

a grep argument to specify if grep use the argumnet as string or not

...

Other options

Value

filtered_maf a filtered maf file